The final remaining relics Darkseid needed were being guarded by A.R.G.U.S. at their HQ, so Darkseid decided to use a Boom Tube to transport the building and all its contents to his base in the Amazon Rainforest. The Female Furies retrieved the relics and put them into place while Wonder Woman fought Darkseid. With the relics' power, Darkseid was able to open a portal to Themyscira. As it is impossible for one who has set foot on Themyscira to return after leaving, Diana was unable to follow Grail through the portal. Grail invaded and began transforming the Amazons into creatures resembling Darkseid's Parademons. As Jason had never actually set foot on Themyscira, he followed Grail and met his mother Hippolyta for the first time since his birth. While Jason and Hippolyta fought off the transformed Amazons, Wonder Woman was able to defeat Darkseid through her love for her deceased father, Zeus, and her half-siblings, calling their spirits out of Darkseid's body and destroying him from the inside. The Amazons captured Grail and imprisoned her in the prison beneath Themyscira, alongside Ares, while Darkseid re-emerged somewhere on Earth. Jason was gifted a magical spear from his mother and returned to Earth.
Wonder Woman, Hermes and Zola is at a café where a guy called Lennox, who knew that Zola is pregnant with Zeus and who Wonder Woman and Hermes really is arrived there, and tells to Wonder Woman that he is Diana’s brother. He tells to Diana that she has to be at the London Bridge at six, or she’d regret it. She’s there at six, and Poseidon arrives, and tells Diana that he wants to be the new god of the gods, whereas Lennox goes into a cave shown to him by Hermes, and there he meets Hades who also wants to claim the throne of the Heavens. After Hera arrives, Wonder Woman tricks all of them, and Hades goes back into his cave, and tricks Zola to come to him and kidnap her, he told Diana that they struck a bargain, and when she has fulfilled her’s, she shall get Zola back.
After the death of Superman, Wonder Woman became depressed and began to remember her origins differently, questioning aspects of her past such as whether she truly was mocked as a child and her relationship with Ares. In a fit of rage Diana crushed the helmet of War. Realizing that she shouldn't have been able to do that, she used the Lasso of Truth on herself and discovered that she had been deceived. Diana traveled to Olympus for answers, but found it abandoned. She also found herself unable to return to her home of Themyscira.
A shocked Diana apologized to Antiope and abruptly left the training session. She wandered off to a cliff on the Themysciran seashore and examined her gauntlets in awe. As she stood there, she noticed an airplane burst through the forcefield surrounding Themyscira and crash in the nearby waters. Seeing even from a great distance away that someone was trapped inside the sinking aircraft, she leaped down the ocean and rescued the pilot, none other than a human soldier named Steve Trevor. She pulled him out of the water and onto the Themysciran shore. As he came to, she noted in disbelief that he was a man, as she had never seen one before. Though somewhat confused, Steve affirmed that he was, rhetorically asking whether or not he looked like one.
Following the events of the Darkseid War, Wonder Woman is told by the dying Myrina Black that on the night of Diana's birth, Hippolyta gave birth to a twin child. This child was revealed to be male, known as Jason, and is said to be incredibly powerful. Wonder Woman makes it her mission to find him. At the same time, she finds the truth behind her origin and history is now cluttered, as she remembers two versions: the pre-Flashpoint one, and the New 52 rendition. She cannot locate Themiscyra or her fellow Amazons and the Lasso of Truth does not work for her anymore.
By the end of the war, Diana began to lose faith in both humanity and herself after Ares opened her eyes to humanity's potential for evil. While she still believed in the power of love and compassion to change humanity for the better, Diana was left sobered and emotionally broken over certain events from the war, such as the use of Dr. Poison's gas to massacre the entire village of Veld, and Steve Trevor's self-sacrificing death. After witnessing a "century of horrors", Diana largely stepped away from heroics until she witnessed the seemingly unstoppable Doomsday wreck havoc; ultimately joining in to battle him alongside Batman and Superman. After witnessing Superman's own sacrifice to stop the monster, however, Diana turned once again towards heroics; demonstrating not only her underlying belief in her own core values, but also in the positive effect true heroes can have on the world.
As Wonder Woman joins the Battle against Doomsday, she arrives just in time to save Batman from Doomsday's lethal thermal blast, deflecting the beams with her indestructible bracelets. She then jointly attacks Doomsday with Superman while Batman tries to expose the creature to Kryptonite, allowing its destruction. She relentlessly battles the monster, and despite Doomsday being stronger, Wonder Woman held her own, parrying a tremendous punch with the Sword of Athena, and then slicing off Doomsday's right arm with it. Eventually, Batman baits the monster into coming closer to her, allowing Wonder Woman to hurl the noose of her unbreakable Lasso of Hestia around his torso.
The relaunch was beset by scheduling problems as described by Grady Hendrix in his article, "Out for Justice" in The New York Sun. "By 2007 [Heinberg had] only delivered four issues ... Ms. Picoult's five issues hemorrhaged readers ... and Amazons Attack!, a miniseries commissioned to fill a hole in the book's publishing schedule caused by Mr. Heinberg's delays, was reviled by fans who decried it as an abomination." Picoult's interpretation received acclaim from critics, who would have liked to have seen the novelist given more time to work. Min Jin Lee of The Times stated, "By furnishing a 21st-century emotional characterization for a 20th-century creation, Picoult reveals the novelist's dextrous hand."
A pantheon of terrible Dark Gods has come to Earth, bringing with them death and destruction. People everywhere are renouncing their own faith in favor of the Dark Gods’, causing riots and worse. The Justice League was supposed to be their cavalry, but with their defeat, Diana and Jason are on their own. The Star Sapphires summon Wonder Woman to help them conquer their own threat, and Jason is left truly alone. Diana is left with no choice but to help the Star Sapphires, while praying Jason can hold out against the dark deities until her return…
Unfortunately, not long after Diana left, Hera came for her vengeance, and though she could not bring herself to kill Hippolyta, she could not forgive her either. Feeling regret at giving up the only real family she had, Wonder Woman returned to Themyscira to find the Amazons absent, and her mother turned to stone. Shortly after, Wonder Woman encountered Lennox, a man who claimed to be another of Zeus' bastard children. After learning that Zeus has gone missing, they confronted the Gods of Olympus, Poseidon and Hades, in order to prevent them from taking over Zeus’ throne. To prevent a war between gods, Diana proposed that the two brothers share Heaven with one ruling during the day, and the other at night. Hera angrily interceded, which was what Diana had planned, and using Hermes' staff she transported herself to Mount Olympus to face Hera alone. She warned that she would make Hera regret what she had done to her mother before returning to Earth. Unfortunately, by the time she had returned, Hades had kidnapped Zola with the warning that Diana would need to make good on her bargain or Zola and her child would die.